STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgsm1Small G protein signaling modulator 1. (1093 aa)    
Predicted Functional Partners:
Rab9
RAB9A, member RAS oncogene family.
    
 
 0.934
Rab9b
RAB9B, member RAS oncogene family.
    
 
 0.858
Rabgef1
RAB guanine nucleotide exchange factor (GEF) 1.
     
 0.684
Rab7b
RAB7B, member RAS oncogene family.
    
 
 0.583
Sgsm3
Small G protein signaling modulator 3.
      
 0.544
Cetn1
Centrin 1.
    
   0.543
Cetn2
Centrin 2.
    
   0.543
ENSMOCP00000020630
annotation not available
    
   0.543
Dpysl4
Dihydropyrimidinase like 4.
      
 0.540
Cetn3
Centrin 3.
    
   0.539
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.