STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Siah3Siah E3 ubiquitin protein ligase family member 3. (267 aa)    
Predicted Functional Partners:
Cacybp
Calcyclin binding protein.
    
 0.967
Tbl1x
Transducin beta like 1 X-linked.
    
 0.780
Tbl1xr1
Transducin beta like 1 X-linked receptor 1.
    
 0.780
Ube2d4
Ubiquitin conjugating enzyme E2 D4 (putative).
    
 0.724
LOC101998160
Ubiquitin-conjugating enzyme E2 N.
    
 0.724
Ube2e1
Ubiquitin conjugating enzyme E2 E1.
    
 0.724
Cnfn
Cornifelin.
    
 0.724
ENSMOCP00000014544
annotation not available
    
 0.724
Ube2d3
Ubiquitin conjugating enzyme E2 D3.
    
 0.724
Ube2e3
Ubiquitin conjugating enzyme E2 E3.
    
 0.724
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.