STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmp8Matrix metallopeptidase 8. (469 aa)    
Predicted Functional Partners:
Timp3
TIMP metallopeptidase inhibitor 3.
   
 0.898
Timp2
TIMP metallopeptidase inhibitor 2.
   
 0.896
Mmp9
Matrix metallopeptidase 9.
   
0.851
Timp4
TIMP metallopeptidase inhibitor 4.
    
 0.814
Elane
Neutrophil elastase.
   
 0.789
Pla2g4a
Phospholipase A2 group IVA.
     
 0.755
Prtn3
Proteinase 3.
   
 0.748
Bsg
Basigin (Ok blood group).
    
 0.731
Mmp7
Matrix metallopeptidase 7.
  
0.726
Plg
Plasminogen.
    
 0.703
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.