STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psmb10Proteasome 20S subunit beta 10. (273 aa)    
Predicted Functional Partners:
Psma1
Proteasome 20S subunit alpha 1.
   
 0.999
Psmb4
Proteasome 20S subunit beta 4.
   
 0.999
Psmb9
Proteasome 20S subunit beta 9.
   
0.998
Psma3
Proteasome 20S subunit alpha 3.
   
 0.998
Psmb8
Proteasome 20S subunit beta 8.
   
0.998
Psmb1
Proteasome 20S subunit beta 1.
   
 0.997
Psmd4
Proteasome 26S subunit, non-ATPase 4.
   
 0.996
Psma4
Proteasome 20S subunit alpha 4.
   
0.995
ENSMOCP00000002449
annotation not available
   
0.994
Psmd14
Proteasome 26S subunit, non-ATPase 14.
   
 0.994
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.