STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sun5Sad1 and UNC84 domain containing 5. (365 aa)    
Predicted Functional Partners:
LOC101983738
Nesprin-1-like.
    
 0.804
Syne2
Spectrin repeat containing, nuclear envelope 2.
    
 0.783
Lmnb2
Lamin B2.
    
 0.736
Lmnb1
Lamin B1.
    
 0.736
Lmna
Lamin A/C.
    
 0.705
Lmntd1
Lamin tail domain containing 1.
    
 0.696
Syne3
Spectrin repeat containing nuclear envelope family member 3.
    
 
 0.652
Gfap
Glial fibrillary acidic protein.
    
 0.640
Lmntd2
Lamin tail domain containing 2.
    
 0.640
Rdh8
Retinol dehydrogenase 8.
    
 
 0.616
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.