STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rasgef1aRasGEF domain family member 1A. (489 aa)    
Predicted Functional Partners:
Sos1
SOS Ras/Rac guanine nucleotide exchange factor 1.
    
0.667
Rapgef2
Rap guanine nucleotide exchange factor 2.
    
 
0.643
Rapgef6
Rap guanine nucleotide exchange factor 6.
    
 
0.640
Rasgrp2
RAS guanyl releasing protein 2.
    
0.625
Rasgrp1
RAS guanyl releasing protein 1.
    
0.586
Sos2
SOS Ras/Rho guanine nucleotide exchange factor 2.
    
 0.585
Rasgrp4
RAS guanyl releasing protein 4.
    
0.567
Rasgrf2
Ras protein specific guanine nucleotide releasing factor 2.
   
0.544
Rasgrf1
RAS protein-specific guanine nucleotide-releasing factor 1.
   
0.536
Ralgps1
Ral GEF with PH domain and SH3 binding motif 1.
   
0.512
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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