STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fam32aFamily with sequence similarity 32 member A. (112 aa)    
Predicted Functional Partners:
Slu7
SLU7 homolog, splicing factor.
   
 0.993
Prkrip1
PRKR interacting protein 1.
    
 0.982
Syf2
SYF2 pre-mRNA splicing factor.
   
 0.979
ENSMOCP00000001814
annotation not available
    
  0.972
Sde2
SDE2 telomere maintenance homolog.
    
 0.972
ENSMOCP00000005742
annotation not available
    
  0.972
Cdc40
Cell division cycle 40.
    
 0.962
Ppil1
Peptidylprolyl isomerase like 1.
    
  0.962
Cactin
Cactin, spliceosome C complex subunit.
    
 0.952
Dhx8
DEAH-box helicase 8.
    
 0.920
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.