STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PnisrPNN interacting serine and arginine rich protein. (815 aa)    
Predicted Functional Partners:
Luc7l3
LUC7 like 3 pre-mRNA splicing factor.
   
  
 0.971
Mysm1
Myb like, SWIRM and MPN domains 1.
   
 0.947
Pnn
Pinin, desmosome associated protein.
   
 
 0.940
Srsf11
Serine and arginine rich splicing factor 11.
   
 
 0.937
Smarcb1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
    
 0.933
Srek1
Splicing regulatory glutamic acid and lysine rich protein 1.
   
 
0.930
Pbrm1
Polybromo 1.
    
 0.925
Prpf39
pre-mRNA processing factor 39.
   
  
 0.910
ENSMOCP00000025681
annotation not available
   
  0.892
Phf10
PHD finger protein 10.
    
 0.888
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.