STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TnxbTenascin XB. (3046 aa)    
Predicted Functional Partners:
Cd40lg
CD40 ligand.
    
   0.887
Itga9
Integrin alpha 9.
    
 0.881
Itga3
Integrin subunit alpha 3.
    
 0.881
Itgav
Integrin subunit alpha V.
    
 0.881
Itga8
Integrin subunit alpha 8.
    
 0.880
Itga1
Integrin subunit alpha 1.
    
 0.877
Itga4
Integrin subunit alpha 4.
    
 0.877
Itga5
Integrin subunit alpha 5.
    
 0.877
Itgb1
Integrin subunit beta 1.
    
0.873
Itga2
Integrin subunit alpha 2.
    
 0.869
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.