STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spata9Spermatogenesis associated 9. (279 aa)    
Predicted Functional Partners:
Dkkl1
Dickkopf like acrosomal protein 1.
  
   
 0.595
Odf1
Outer dense fiber of sperm tails 1.
  
   
 0.530
Cabyr
Calcium binding tyrosine phosphorylation regulated.
  
   
 0.529
Rnf123
Ring finger protein 123.
      
 0.493
Asb6
Ankyrin repeat and SOCS box containing 6.
      
 0.485
Kif24
Kinesin family member 24.
      
 0.472
Fli1
Fli-1 proto-oncogene, ETS transcription factor.
      
 0.443
Spatc1
Spermatogenesis and centriole associated 1.
      
 0.443
Spert
Chibby family member 2.
      
 0.443
Opalin
Oligodendrocytic myelin paranodal and inner loop protein.
  
     0.400
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.