STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cnn1Calponin 1. (297 aa)    
Predicted Functional Partners:
Actg2
Actin gamma 2, smooth muscle.
   
 0.930
Wdr90
WD repeat domain 90.
    
 
 0.924
Myh11
Myosin heavy chain 11.
   
  
 0.892
ENSMOCP00000008000
annotation not available
  
 
0.815
Acta2
Actin alpha 2, smooth muscle.
   
 0.815
Tagln
Transgelin.
  
 
0.812
Mrgprf
MAS related GPR family member F.
   
    0.810
Calml4
Calmodulin like 4.
   
 0.769
Calb2
Calbindin 2.
   
 0.765
Enkur
Enkurin, TRPC channel interacting protein.
   
 
 0.744
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.