STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Col24a1Collagen, type XXIV, alpha 1. (1708 aa)    
Predicted Functional Partners:
Pcolce2
Procollagen C-endopeptidase enhancer 2.
    
 0.742
Tep1
Telomerase associated protein 1.
    
 0.741
Col22a1
Collagen, type XXII, alpha 1.
  
0.724
ENSMOCP00000019141
annotation not available
    
 0.722
Col6a2
Collagen type VI alpha 2 chain.
   
0.721
Serpinh1
Serpin family H member 1.
    
 0.718
Plod1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.702
Plod2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.694
Ttc41
Tetratricopeptide repeat protein 41-like.
    
 0.691
Plod3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
 0.672
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.