STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMOCP00000010507annotation not available (282 aa)    
Predicted Functional Partners:
Hnrnpab
Heterogeneous nuclear ribonucleoprotein A/B.
   
 0.843
Syncrip
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 0.815
Hnrnpu
Heterogeneous nuclear ribonucleoprotein U.
   
 0.789
Ncbp2
Nuclear cap binding protein subunit 2.
   
  0.761
Ddx6
DEAD-box helicase 6.
  
 
 0.756
Sympk
Symplekin.
    
 0.752
Snrpd3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.741
Tjp1
Tight junction protein 1.
    
 0.739
Hnrnpr
Heterogeneous nuclear ribonucleoprotein R.
   
 0.731
ENSMOCP00000016460
annotation not available
   
 0.731
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.