STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcp1Lymphocyte cytosolic protein 1. (609 aa)    
Predicted Functional Partners:
Capzb
Capping actin protein of muscle Z-line subunit beta.
    
 0.905
Laptm5
Lysosomal protein transmembrane 5.
   
    0.810
Actb
Actin beta.
   
 
 0.750
Acte1
Actin, epsilon 1.
   
 
 0.744
Acta1
Actin alpha 1, skeletal muscle.
   
 
 0.744
Actc1
Actin alpha cardiac muscle 1.
   
 
 0.744
Acta2
Actin alpha 2, smooth muscle.
   
 
 0.744
Actr2
Actin related protein 2.
   
 
 0.714
Fscn1
Fascin actin-bundling protein 1.
     
 0.709
Dbnl
Drebrin like.
   
 
 0.696
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.