STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101996891Cathepsin M-like. (333 aa)    
Predicted Functional Partners:
Csta
Cystatin A.
   
 0.817
Cd74
CD74 molecule.
   
 0.800
Grn
Granulin precursor.
   
 0.755
Ctsb
Cathepsin B.
  
0.726
Ctsh
Cathepsin H.
  
 
0.719
Ctsk
Cathepsin K.
  
 
0.681
Ctss
Cathepsin S.
  
 
0.680
Rps14
Ribosomal protein S14.
   
 0.676
ENSMOCP00000012172
annotation not available
   
 0.676
ENSMOCP00000014318
annotation not available
   
 0.676
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.