Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Hgfac | Lrit1 | ENSMOCP00000010610 | ENSMOCP00000013803 | HGF activator. | Leucine rich repeat, Ig-like and transmembrane domains 1. | 0.914 |
Hgfac | Lrit3 | ENSMOCP00000010610 | ENSMOCP00000012868 | HGF activator. | Leucine rich repeat, Ig-like and transmembrane domains 3. | 0.914 |
Hgfac | Met | ENSMOCP00000010610 | ENSMOCP00000006670 | HGF activator. | MET proto-oncogene, receptor tyrosine kinase. | 0.968 |
Hgfac | Mst1r | ENSMOCP00000010610 | ENSMOCP00000007460 | HGF activator. | Macrophage stimulating 1 receptor (c-met-related tyrosine kinase). | 0.957 |
Hgfac | Ptk7 | ENSMOCP00000010610 | ENSMOCP00000007125 | HGF activator. | Protein tyrosine kinase 7 (inactive). | 0.986 |
Hgfac | Ripk4 | ENSMOCP00000010610 | ENSMOCP00000005120 | HGF activator. | Receptor interacting serine/threonine kinase 4. | 0.931 |
Hgfac | Rnasel | ENSMOCP00000010610 | ENSMOCP00000009638 | HGF activator. | Ribonuclease L. | 0.932 |
Hgfac | Serpinc1 | ENSMOCP00000010610 | ENSMOCP00000022614 | HGF activator. | Serpin family C member 1. | 0.922 |
Hgfac | Spint1 | ENSMOCP00000010610 | ENSMOCP00000016041 | HGF activator. | Serine peptidase inhibitor, Kunitz type 1. | 0.977 |
Hgfac | Wdr90 | ENSMOCP00000010610 | ENSMOCP00000006955 | HGF activator. | WD repeat domain 90. | 0.951 |
Lrit1 | Hgfac | ENSMOCP00000013803 | ENSMOCP00000010610 | Leucine rich repeat, Ig-like and transmembrane domains 1. | HGF activator. | 0.914 |
Lrit1 | Lrit3 | ENSMOCP00000013803 | ENSMOCP00000012868 | Leucine rich repeat, Ig-like and transmembrane domains 1. | Leucine rich repeat, Ig-like and transmembrane domains 3. | 0.805 |
Lrit1 | Met | ENSMOCP00000013803 | ENSMOCP00000006670 | Leucine rich repeat, Ig-like and transmembrane domains 1. | MET proto-oncogene, receptor tyrosine kinase. | 0.853 |
Lrit1 | Mst1r | ENSMOCP00000013803 | ENSMOCP00000007460 | Leucine rich repeat, Ig-like and transmembrane domains 1. | Macrophage stimulating 1 receptor (c-met-related tyrosine kinase). | 0.853 |
Lrit1 | Ptk7 | ENSMOCP00000013803 | ENSMOCP00000007125 | Leucine rich repeat, Ig-like and transmembrane domains 1. | Protein tyrosine kinase 7 (inactive). | 0.981 |
Lrit1 | Ripk4 | ENSMOCP00000013803 | ENSMOCP00000005120 | Leucine rich repeat, Ig-like and transmembrane domains 1. | Receptor interacting serine/threonine kinase 4. | 0.913 |
Lrit1 | Rnasel | ENSMOCP00000013803 | ENSMOCP00000009638 | Leucine rich repeat, Ig-like and transmembrane domains 1. | Ribonuclease L. | 0.909 |
Lrit1 | Spint1 | ENSMOCP00000013803 | ENSMOCP00000016041 | Leucine rich repeat, Ig-like and transmembrane domains 1. | Serine peptidase inhibitor, Kunitz type 1. | 0.433 |
Lrit3 | Hgfac | ENSMOCP00000012868 | ENSMOCP00000010610 | Leucine rich repeat, Ig-like and transmembrane domains 3. | HGF activator. | 0.914 |
Lrit3 | Lrit1 | ENSMOCP00000012868 | ENSMOCP00000013803 | Leucine rich repeat, Ig-like and transmembrane domains 3. | Leucine rich repeat, Ig-like and transmembrane domains 1. | 0.805 |
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