STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spns2Sphingolipid transporter 2. (540 aa)    
Predicted Functional Partners:
Sphk1
Sphingosine kinase 1.
     
 0.799
Sphk2
Sphingosine kinase 2.
     
 0.741
Enpp2
Ectonucleotide pyrophosphatase/phosphodiesterase 2.
     
 0.717
Kdsr
3-ketodihydrosphingosine reductase.
     
 0.707
Rtcb
RNA 2',3'-cyclic phosphate and 5'-OH ligase.
    
 0.700
ENSMOCP00000013319
annotation not available
   
 
 0.689
Dhdh
Dihydrodiol dehydrogenase.
   
 
 0.689
ND4
NADH dehydrogenase subunit 4.
    
 
 0.680
Gba2
Glucosylceramidase beta 2.
    
 0.661
Ugcg
UDP-glucose ceramide glucosyltransferase.
     
 0.656
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.