STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101988052High mobility group protein B2. (210 aa)    
Predicted Functional Partners:
Actr8
Actin related protein 8.
    
 0.763
Polrmt
RNA polymerase mitochondrial.
    
 0.753
Actr5
Actin related protein 5.
    
 0.745
ENSMOCP00000023143
annotation not available
  
0.743
Ruvbl1
RuvB like AAA ATPase 1.
    
 0.743
ENSMOCP00000003279
annotation not available
  
0.742
ENSMOCP00000005078
annotation not available
  
0.742
Gtf2h1
General transcription factor IIH subunit 1.
    
 0.742
ENSMOCP00000020511
annotation not available
  
0.742
ENSMOCP00000005915
annotation not available
  
0.741
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.