STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clip4CAP-Gly domain containing linker protein family member 4. (706 aa)    
Predicted Functional Partners:
Mtor
Mechanistic target of rapamycin kinase.
   
  0.748
Bub3
BUB3 mitotic checkpoint protein.
    
 0.705
Nfatc4
Nuclear factor of activated T cells 4.
    
 0.687
Ripk1
Receptor interacting serine/threonine kinase 1.
    
  0.663
Tnfrsf1a
TNF receptor superfamily member 1A.
    
  0.663
LOC101978981
Ubiquitin-like.
    
  0.639
Mapre1
Microtubule associated protein RP/EB family member 1.
    
 
 0.632
Mapre2
Microtubule associated protein RP/EB family member 2.
    
 
 0.632
Mapre3
Microtubule associated protein RP/EB family member 3.
    
 
 0.632
Dnmt3a
DNA methyltransferase 3 alpha.
    
 
 0.632
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.