STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sox21SRY (sex determining region Y)-box 21. (200 aa)    
Predicted Functional Partners:
ENSMOCP00000003189
annotation not available
    
 0.747
Pou5f2
POU domain class 5, transcription factor 2.
    
 0.747
Pou5f1
POU class 5 homeobox 1.
    
 0.747
Nanog
Nanog homeobox.
    
 0.728
Ctnnb1
Catenin beta 1.
    
 0.693
Jup
Junction plakoglobin.
    
 0.693
ENSMOCP00000010353
annotation not available
    
 0.615
Nr5a1
Nuclear receptor subfamily 5 group A member 1.
    
 0.615
Sox6
SRY-box transcription factor 6.
    
0.611
Tcf7
Transcription factor 7.
    
 0.604
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.