STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tnfrsf1bTNF receptor superfamily member 1B. (477 aa)    
Predicted Functional Partners:
Tnf
Tumor necrosis factor.
   
 0.998
Traf2
TNF receptor associated factor 2.
   
 0.991
Traf1
TNF receptor associated factor 1.
   
 0.976
Lta
Lymphotoxin alpha.
    
 0.968
Tnfrsf1a
TNF receptor superfamily member 1A.
   
0.948
Traf3
TNF receptor associated factor 3.
   
 0.914
Traf5
TNF receptor associated factor 5.
   
 0.896
Tnfsf8
TNF superfamily member 8.
   
 
 0.864
Tnfsf15
TNF superfamily member 15.
     
 0.840
Ltb
Lymphotoxin beta.
   
 
 0.819
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.