Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Col1a2 | Col3a1 | ENSMOCP00000009401 | ENSMOCP00000003146 | Collagen type I alpha 2 chain. | Collagen type III alpha 1 chain. | 0.998 |
Col1a2 | Dcn | ENSMOCP00000009401 | ENSMOCP00000011589 | Collagen type I alpha 2 chain. | Decorin. | 0.914 |
Col1a2 | ENSMOCP00000009815 | ENSMOCP00000009401 | ENSMOCP00000009815 | Collagen type I alpha 2 chain. | annotation not available | 0.540 |
Col1a2 | Fbn1 | ENSMOCP00000009401 | ENSMOCP00000018311 | Collagen type I alpha 2 chain. | Fibrillin 1. | 0.936 |
Col1a2 | Lum | ENSMOCP00000009401 | ENSMOCP00000001511 | Collagen type I alpha 2 chain. | Lumican. | 0.974 |
Col3a1 | Col1a2 | ENSMOCP00000003146 | ENSMOCP00000009401 | Collagen type III alpha 1 chain. | Collagen type I alpha 2 chain. | 0.998 |
Col3a1 | Dcn | ENSMOCP00000003146 | ENSMOCP00000011589 | Collagen type III alpha 1 chain. | Decorin. | 0.927 |
Col3a1 | ENSMOCP00000009815 | ENSMOCP00000003146 | ENSMOCP00000009815 | Collagen type III alpha 1 chain. | annotation not available | 0.488 |
Col3a1 | Fbn1 | ENSMOCP00000003146 | ENSMOCP00000018311 | Collagen type III alpha 1 chain. | Fibrillin 1. | 0.919 |
Col3a1 | Lum | ENSMOCP00000003146 | ENSMOCP00000001511 | Collagen type III alpha 1 chain. | Lumican. | 0.921 |
Dcn | Col1a2 | ENSMOCP00000011589 | ENSMOCP00000009401 | Decorin. | Collagen type I alpha 2 chain. | 0.914 |
Dcn | Col3a1 | ENSMOCP00000011589 | ENSMOCP00000003146 | Decorin. | Collagen type III alpha 1 chain. | 0.927 |
Dcn | ENSMOCP00000009815 | ENSMOCP00000011589 | ENSMOCP00000009815 | Decorin. | annotation not available | 0.964 |
Dcn | Egfr | ENSMOCP00000011589 | ENSMOCP00000001207 | Decorin. | Epidermal growth factor receptor. | 0.959 |
Dcn | Fbn1 | ENSMOCP00000011589 | ENSMOCP00000018311 | Decorin. | Fibrillin 1. | 0.938 |
Dcn | Lum | ENSMOCP00000011589 | ENSMOCP00000001511 | Decorin. | Lumican. | 0.952 |
Dcn | Met | ENSMOCP00000011589 | ENSMOCP00000006670 | Decorin. | MET proto-oncogene, receptor tyrosine kinase. | 0.932 |
Dcn | Tgfb2 | ENSMOCP00000011589 | ENSMOCP00000026697 | Decorin. | Transforming growth factor beta 2. | 0.912 |
Dcn | Tlr2 | ENSMOCP00000011589 | ENSMOCP00000004696 | Decorin. | Toll like receptor 2. | 0.913 |
Dcn | Tlr4 | ENSMOCP00000011589 | ENSMOCP00000020632 | Decorin. | Toll like receptor 4. | 0.914 |
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