STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMOCP00000011769annotation not available (325 aa)    
Predicted Functional Partners:
ENSMOCP00000014733
annotation not available
 
     0.892
ENSMOCP00000007409
annotation not available
 
     0.862
Smarca1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.
   
 
 0.821
Nipbl
NIPBL cohesin loading factor.
   
    0.801
ENSMOCP00000011869
annotation not available
   
 
 0.772
ENSMOCP00000018807
annotation not available
   
 
 0.772
Setd2
SET domain containing 2, histone lysine methyltransferase.
   
   0.760
Chd1l
Chromodomain helicase DNA binding protein 1-like.
   
 
 0.728
Hells
Helicase, lymphoid specific.
   
 
 0.728
Ep300
E1A binding protein p300.
   
 
 
0.718
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.