STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spag6Sperm associated antigen 6. (509 aa)    
Predicted Functional Partners:
Kpnb1
Karyopherin subunit beta 1.
   
 0.911
Cse1l
Chromosome segregation 1 like.
   
 0.892
Nup153
Nucleoporin 153.
    
 
 0.755
Cfap45
Cilia and flagella associated protein 45.
   
 
 0.750
Ncbp1
Nuclear cap binding protein subunit 1.
   
 
 0.749
Ect2l
Epithelial cell transforming 2 like.
   
   0.738
Ncbp2
Nuclear cap binding protein subunit 2.
    
 
 0.729
Nup50
Nucleoporin 50.
   
 
 0.719
Lrguk
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.709
Rrp8
Ribosomal RNA processing 8.
    
   0.708
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.