STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Limd1LIM domains containing 1. (661 aa)    
Predicted Functional Partners:
Lats1
Large tumor suppressor kinase 1.
    
 0.982
ENSMOCP00000001317
annotation not available
    
 0.974
Sav1
Salvador family WW domain containing protein 1.
   
 0.935
Haus3
HAUS augmin like complex subunit 3.
   
 0.913
Haus1
HAUS augmin like complex subunit 1.
   
 0.908
Haus8
HAUS augmin like complex subunit 8.
    
 0.882
Ajuba
Ajuba LIM protein.
    
 
0.858
Rbm42
RNA binding motif protein 42.
    
 0.845
Haus5
HAUS augmin like complex subunit 5.
    
 0.845
Egln1
Egl-9 family hypoxia inducible factor 1.
    
 0.806
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.