STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Metap1Methionyl aminopeptidase 1. (336 aa)    
Predicted Functional Partners:
Rps3
Ribosomal protein S3.
  
 
 0.956
Fau
FAU ubiquitin like and ribosomal protein S30 fusion.
    
   0.920
Gtpbp4
GTP binding protein 4.
   
 
 0.914
ENSMOCP00000004146
annotation not available
  
   0.908
ENSMOCP00000010266
annotation not available
  
   0.908
Rpl23
Ribosomal protein L23.
  
   0.908
ENSMOCP00000000131
annotation not available
  
 
 0.899
ENSMOCP00000003841
annotation not available
  
 
 0.899
ENSMOCP00000008869
annotation not available
  
 
 0.899
Rpl35
Ribosomal protein L35.
  
 
 0.899
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.