STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmbr1lLimb development membrane protein 1 like. (489 aa)    
Predicted Functional Partners:
Shh
Sonic hedgehog signaling molecule.
 
   
 0.769
Ptch2
Patched 2.
     
 0.734
Ptch1
Patched 1.
     
 0.733
Ihh
Indian hedgehog signaling molecule.
 
   
 0.705
Gm19410
Low-density lipoprotein receptor-related protein 1-like.
    
  0.688
Lrp2
LDL receptor related protein 2.
    
  0.688
Lcn3
Vomeronasal secretory protein 1-like.
    
 
 0.646
Dhh
Desert hedgehog signaling molecule.
 
   
 0.560
Sh2d3c
SH2 domain containing 3C.
      
 0.558
Fkbp10
FKBP prolyl isomerase 10.
    
 
 0.538
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.