STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plod1Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1. (727 aa)    
Predicted Functional Partners:
Plod2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
  
0.935
Plod3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
  
0.933
Colgalt1
Collagen beta(1-O)galactosyltransferase 1.
   
0.916
Colgalt2
Collagen beta(1-O)galactosyltransferase 2.
   
0.915
Nsd1
Nuclear receptor-binding SET-domain protein 1.
    
 0.901
Ehmt2
Euchromatic histone lysine methyltransferase 2.
    
  0.878
Smyd3
SET and MYND domain containing 3.
   
 0.878
Ehmt1
Euchromatic histone lysine methyltransferase 1.
    
  0.878
Setd7
SET domain containing 7, histone lysine methyltransferase.
    
 0.874
Suv39h2
Suppressor of variegation 3-9 homolog 2.
    
 0.872
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.