STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Scaf1SR-related CTD associated factor 1. (1253 aa)    
Predicted Functional Partners:
Erf
ETS2 repressor factor.
   
    0.967
ENSMOCP00000010893
annotation not available
   
    0.901
Rexo1
RNA exonuclease 1 homolog.
   
    0.806
Prrc2a
Proline rich coiled-coil 2A.
   
  
 0.774
ENSMOCP00000010319
annotation not available
   
    0.717
Nacc1
Nucleus accumbens associated 1.
   
    0.717
Prr12
Proline rich 12.
  
  
 0.680
Ptpn23
Protein tyrosine phosphatase non-receptor type 23.
   
    0.670
Phrf1
PHD and ring finger domains 1.
   
 
0.616
Taok2
TAO kinase 2.
   
  
 0.593
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.