STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L3mbtl1L3MBTL histone methyl-lysine binding protein 1. (825 aa)    
Predicted Functional Partners:
Trp53
Tumor protein p53.
   
 0.897
Cbx3
Chromobox 3.
    
 0.818
Cbx4
Chromobox 4.
    
 0.809
Rnf2
Ring finger protein 2.
    
 0.777
Ring1
Ring finger protein 1.
    
 0.774
Pcgf6
Polycomb group ring finger 6.
    
 0.738
LOC101995351
Chromobox protein homolog 8.
    
 0.729
Cbx8
Chromobox 8.
    
 0.729
Bmi1
BMI1 proto-oncogene, polycomb ring finger.
    
 0.725
E2f4
E2F transcription factor 4.
    
 0.724
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.