STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Yae1d1YAE1 maturation factor of ABCE1. (225 aa)    
Predicted Functional Partners:
LTO1
LTO1 maturation factor of ABCE1.
   
 
 0.972
Abce1
ATP binding cassette subfamily E member 1.
    
 
 0.951
Ndor1
NADPH dependent diflavin oxidoreductase 1.
      
 0.604
ENSMOCP00000016297
annotation not available
      
 0.589
Ciapin1
Cytokine induced apoptosis inhibitor 1.
      
 0.575
Mrpl50
Mitochondrial ribosomal protein L50.
   
    0.554
Xpot
Exportin for tRNA.
      
 0.552
Zc3h4
Zinc finger CCCH-type containing 4.
      
 0.516
Ciao3
Cytosolic iron-sulfur assembly component 3.
      
 0.441
Narf
Nuclear prelamin A recognition factor.
      
 0.441
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.