STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Larp7La ribonucleoprotein 7, transcriptional regulator. (574 aa)    
Predicted Functional Partners:
Cdk9
Cyclin dependent kinase 9.
   
 0.955
Mepce
Methylphosphate capping enzyme.
    
 
 0.954
Ccnt1
Cyclin T1.
   
 0.872
Hexim1
HEXIM P-TEFb complex subunit 1.
    
 
 0.792
Hexim2
HEXIM P-TEFb complex subunit 2.
    
 
 0.790
Ccnt2
Cyclin T2.
   
 0.789
Fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.763
Ncbp1
Nuclear cap binding protein subunit 1.
   
 0.753
Ncbp2
Nuclear cap binding protein subunit 2.
   
 0.747
Lyar
Ly1 antibody reactive.
   
  
 0.742
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.