STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cfap20Cilia and flagella associated protein 20. (193 aa)    
Predicted Functional Partners:
Pacrg
PARK2 co-regulated.
    
 
 0.930
Efhc1
EF-hand domain containing 1.
    
 
 0.927
Efhc2
EF-hand domain containing 2.
    
 
 0.927
Cfap45
Cilia and flagella associated protein 45.
    
 
 0.917
Ribc2
RIB43A domain with coiled-coils 2.
    
 
 0.913
Tekt2
Tektin 2.
   
   0.913
1700094D03Rik
Chromosome unknown C1orf189 homolog.
    
   0.912
1700013F07Rik
Chromosome unknown C1orf194 homolog.
    
   0.912
Ccdc173
Coiled-coil domain containing 173.
    
   0.912
Mns1
Meiosis specific nuclear structural 1.
    
   0.912
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.