STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kpna7Karyopherin subunit alpha 7. (491 aa)    
Predicted Functional Partners:
Kpnb1
Karyopherin subunit beta 1.
   
 0.959
Cse1l
Chromosome segregation 1 like.
   
 0.951
Cdk1
Cyclin dependent kinase 1.
   
 0.891
Ncbp1
Nuclear cap binding protein subunit 1.
   
 
 0.885
Ranbp2
E3 SUMO-protein ligase RanBP2.
   
 
 0.881
Kpna6
Karyopherin subunit alpha 6.
  
 
0.879
Kpna5
Karyopherin subunit alpha 5.
  
 
0.858
Ncbp2
Nuclear cap binding protein subunit 2.
    
 
 0.839
Rela
RELA proto-oncogene, NF-kB subunit.
    
  0.828
Pbk
PDZ binding kinase.
   
  0.827
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.