STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smim12Small integral membrane protein 12. (92 aa)    
Predicted Functional Partners:
Hspa9
Heat shock protein family A (Hsp70) member 9.
  
 0.964
Mthfsd
Methenyltetrahydrofolate synthetase domain containing.
  
    0.866
Utp15
UTP15 small subunit processome component.
   
  
 0.865
Nt5c1a
5'-nucleotidase, cytosolic IA.
  
 0.860
Nt5c1b
5'-nucleotidase, cytosolic IB.
  
 0.860
Hyou1
Hypoxia up-regulated 1.
  
 0.853
Psmd1
Proteasome 26S subunit, non-ATPase 1.
   
  0.851
Wdr6
WD repeat domain 6.
   
   0.841
Hspa5
Heat shock protein family A (Hsp70) member 5.
  
 0.839
Ankrd45
Ankyrin repeat domain 45.
  
 0.839
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.