STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nphs1NPHS1 adhesion molecule, nephrin. (1255 aa)    
Predicted Functional Partners:
Kirrel
Kirre like nephrin family adhesion molecule 1.
   
0.988
Kirrel3
Kirre like nephrin family adhesion molecule 3.
   
0.987
Kirrel2
Kirre like nephrin family adhesion molecule 2.
   
0.982
Cd2ap
CD2 associated protein.
    
 0.920
Nck1
NCK adaptor protein 1.
    
 0.894
Nck2
NCK adaptor protein 2.
    
 0.876
Tjp1
Tight junction protein 1.
    
 0.871
Fyn
FYN proto-oncogene, Src family tyrosine kinase.
    
 0.865
Sh3kbp1
SH3 domain containing kinase binding protein 1.
    
 0.863
Afdn
Afadin, adherens junction formation factor.
    
 0.856
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.