STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plekhm3Pleckstrin homology domain containing M3. (758 aa)    
Predicted Functional Partners:
Uvrag
UV radiation resistance associated.
    
 0.843
Wdfy4
WDFY family member 4.
   
 
  0.839
Pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 
 0.537
Def8
Differentially expressed in FDCP 8 homolog.
    
 
0.506
Becn1
Beclin 1.
    
 
 0.490
Gm38100
Beclin-2-like.
    
 
 0.490
Vps45
Vacuolar protein sorting 45 homolog.
     
 0.486
Itsn2
Intersectin 2.
    
   0.485
Itsn1
Intersectin 1.
    
   0.485
C1qbp
Complement C1q binding protein.
   
  
 0.465
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.