STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srsf4Serine and arginine rich splicing factor 4. (490 aa)    
Predicted Functional Partners:
Srsf10
Serine and arginine rich splicing factor 10.
   
0.986
Srpk1
SRSF protein kinase 1.
    
 0.958
Ncbp2
Nuclear cap binding protein subunit 2.
    
 0.949
Srsf1
Serine and arginine rich splicing factor 1.
   
0.938
Nxf1
Nuclear RNA export factor 1.
   
 0.930
Nxf2
Nuclear RNA export factor 2.
   
 0.930
Tra2b
Transformer 2 beta homolog.
   
 0.927
ENSMOCP00000013976
annotation not available
   
0.921
Rbm25
RNA binding motif protein 25.
   
 
 0.909
Ncbp1
Nuclear cap binding protein subunit 1.
   
 0.904
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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