STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PpbpPro-platelet basic protein. (113 aa)    
Predicted Functional Partners:
Cxcl12
C-X-C motif chemokine ligand 12.
   
 0.992
Cxcl10
C-X-C motif chemokine ligand 10.
   
 0.992
Pf4
Platelet factor 4.
  
0.990
Cxcl5
Alveolar macrophage chemotactic factor.
  
0.988
Ccl5
C-C motif chemokine ligand 5.
   
 0.988
Cxcl9
C-X-C motif chemokine ligand 9.
   
 0.987
Ccl28
C-C motif chemokine ligand 28.
    
 0.976
Ccl26
C-C motif chemokine ligand 26.
    
 
 0.962
Cxcl14
C-X-C motif chemokine ligand 14.
    
 
 0.961
Cxcr1
C-X-C chemokine receptor type 1.
   
 0.950
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.