STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Znrf1Zinc and ring finger 1. (227 aa)    
Predicted Functional Partners:
LOC101998160
Ubiquitin-conjugating enzyme E2 N.
    
 
 0.917
ENSMOCP00000014544
annotation not available
    
 
 0.917
ENSMOCP00000026395
annotation not available
    
 
 0.917
LOC101978981
Ubiquitin-like.
   
  0.680
Arrdc5
Arrestin domain containing 5.
      
 0.575
Atg7
Autophagy related 7.
     
 0.559
Uba5
Ubiquitin like modifier activating enzyme 5.
     
 0.559
Uba3
Ubiquitin like modifier activating enzyme 3.
     
 0.559
Ms4a1
Membrane spanning 4-domains A1.
      
 0.552
Vgll4
Vestigial like family member 4.
      
 0.550
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.