STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Surf2Surfeit 2. (258 aa)    
Predicted Functional Partners:
Surf4
Surfeit 4.
      
 0.609
Surf1
Surfeit locus protein 1.
      
 0.603
Surf6
Surfeit 6.
      
 0.550
Prepl
Prolyl endopeptidase like.
      
 0.541
Med22
Mediator complex subunit 22.
   
  
 0.513
Pacrg
PARK2 co-regulated.
      
 0.439
Clcc1
Chloride channel CLIC like 1.
      
 0.432
Nexn
Nexilin F-actin binding protein.
      
 0.431
Lrrc14
Leucine rich repeat containing 14.
      
 0.426
Alg12
ALG12 alpha-1,6-mannosyltransferase.
      
 0.422
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.