STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Uhrf1Ubiquitin like with PHD and ring finger domains 1. (794 aa)    
Predicted Functional Partners:
Dnmt1
DNA methyltransferase 1.
  
 0.993
Usp7
Ubiquitin specific peptidase 7.
    
 
 0.976
Lig1
Ligase I, DNA, ATP-dependent.
   
 
 0.970
Ehmt2
Euchromatic histone lysine methyltransferase 2.
    
 0.874
Pcna
Proliferating cell nuclear antigen.
   
   0.874
Ccna2
Cyclin A2.
   
 
 0.842
Kat5
Lysine acetyltransferase 5.
   
 
 0.838
Hdac1
Histone deacetylase 1.
   
 
 0.822
ENSMOCP00000016007
annotation not available
   
 
 0.822
Cdca8
Cell division cycle associated 8.
   
  
 0.820
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.