STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rbm34RNA binding motif protein 34. (425 aa)    
Predicted Functional Partners:
Brix1
Biogenesis of ribosomes BRX1.
   
 
 0.993
Cebpz
CCAAT enhancer binding protein zeta.
   
 
 0.992
Rpf2
Ribosome production factor 2 homolog.
   
 
 0.991
Rbm28
RNA binding motif protein 28.
   
 
 0.991
Pwp1
PWP1 homolog, endonuclein.
   
 
 0.984
Ftsj3
FtsJ RNA 2'-O-methyltransferase 3.
   
 
 0.983
Ddx24
DEAD-box helicase 24.
   
 0.982
Noc2l
NOC2 like nucleolar associated transcriptional repressor.
   
 
 0.979
Ddx27
DEAD-box helicase 27.
   
 0.978
Ddx56
DEAD-box helicase 56.
   
 0.977
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.