STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Yipf3Yip1 domain family member 3. (347 aa)    
Predicted Functional Partners:
Yipf4
Yip1 domain family member 4.
    
 
 0.861
Yipf6
Yip1 domain family member 6.
   
 
 0.752
Yipf7
Yip1 domain family member 7.
    
 
 0.747
Yipf5
Yip1 domain family member 5.
    
 
 0.747
Selenos
Selenoprotein S.
    
 
 0.708
Tvp23a
Trans-golgi network vesicle protein 23 homolog A.
   
 
 0.659
Cdrt4
CMT1A duplicated region transcript 4.
   
 
 0.659
Tvp23b
Golgi apparatus membrane protein TVP23 homolog B.
   
 
 0.659
Tmed2
Transmembrane p24 trafficking protein 2.
    
 
 0.512
Yipf1
Yip1 domain family member 1.
   
  
 0.506
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.