STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pdcd10Programmed cell death 10. (212 aa)    
Predicted Functional Partners:
Stk26
Serine/threonine kinase 26.
    
 
 0.990
Stk25
Serine/threonine kinase 25.
    
 
 0.990
Stk24
Serine/threonine kinase 24.
    
 
 0.980
Strip1
Striatin interacting protein 1.
    
 
 0.979
Mob4
MOB family member 4, phocein.
   
 
 0.974
Ccm2
CCM2 scaffold protein.
    
 
 0.972
Cttnbp2nl
CTTNBP2 N-terminal like.
    
 
 0.972
Strn3
Striatin 3.
    
 
 0.971
Strn
Striatin.
    
 
 0.970
Sike1
Suppressor of IKBKE 1.
    
 
 0.968
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.