STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chst1Carbohydrate sulfotransferase 1. (411 aa)    
Predicted Functional Partners:
Chst2
Carbohydrate sulfotransferase 2.
  
 
0.850
Chst7
Carbohydrate sulfotransferase 7.
    
0.840
Lum
Lumican.
     
 0.653
Kera
Keratocan.
     
 0.628
Acan
Aggrecan.
     
 0.495
Gcnt1
Glucosaminyl (N-acetyl) transferase 1.
      
 0.481
Prelp
Proline and arginine rich end leucine rich repeat protein.
     
 0.467
Bcan
Brevican.
     
 0.460
Gcnt3
Glucosaminyl (N-acetyl) transferase 3, mucin type.
      
 0.426
Bgn
Biglycan.
     
 0.411
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.