STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lhfpl3LHFPL tetraspan subfamily member 3. (228 aa)    
Predicted Functional Partners:
Pcdh15
Protocadherin 15.
   
 0.803
Cdhr5
Cadherin related family member 5.
   
 0.796
Cib2
Calcium and integrin binding family member 2.
     
 0.723
Tmie
Transmembrane inner ear.
     
 0.692
Tmc2
Transmembrane channel like 2.
   
 
 0.662
Cib3
Calcium and integrin binding family member 3.
     
 0.641
Tmc3
Transmembrane channel like 3.
   
 
 0.629
Tmc1
Transmembrane channel like 1.
   
 
 0.629
Cdhr2
Cadherin related family member 2.
   
 0.579
Cdh23
Cadherin related 23.
   
 0.579
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.