STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Scn3aSodium voltage-gated channel alpha subunit 3. (1981 aa)    
Predicted Functional Partners:
Unc79
Unc-79 homolog.
   
 0.998
Scn1b
Sodium voltage-gated channel beta subunit 1.
    
 0.986
Scn2b
Sodium voltage-gated channel beta subunit 2.
   
 0.977
Scn2a
Sodium channel protein type 2 subunit alpha.
  
 
0.966
Fgf13
Fibroblast growth factor 13.
    
 
 0.924
Scn4b
Sodium voltage-gated channel beta subunit 4.
    
 0.881
Scn9a
Sodium voltage-gated channel alpha subunit 9.
  
 
0.858
Calhm1
Calcium homeostasis modulator 1.
     
 0.853
Wdr35
WD repeat domain 35.
    
 0.850
Ift122
Intraflagellar transport 122.
   
 0.842
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.