STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pram1PML-RARA regulated adaptor molecule 1. (644 aa)    
Predicted Functional Partners:
Nsmce4a
NSE4 homolog A, SMC5-SMC6 complex component.
   
 0.895
Nsmce1
NSE1 homolog, SMC5-SMC6 complex component.
    
 0.892
Smc6
Structural maintenance of chromosomes 6.
    
 0.887
Smc5
Structural maintenance of chromosomes 5.
    
 0.887
Nsmce2
NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.
    
 0.887
Smc3
Structural maintenance of chromosomes 3.
    
 0.752
Ngfr
Nerve growth factor receptor.
    
 0.726
Lcp2
Lymphocyte cytosolic protein 2.
    
 0.720
Rara
Retinoic acid receptor alpha.
    
 
 0.718
Smc1b
Structural maintenance of chromosomes 1B.
   
 0.717
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.