STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppp5cSerine/threonine-protein phosphatase 5. (499 aa)    
Predicted Functional Partners:
Hsp90b1
Heat shock protein 90 beta family member 1.
    
 0.971
Braf
B-Raf proto-oncogene, serine/threonine kinase.
    
 0.966
LOC101994667
Prostaglandin E synthase 3.
    
 0.957
Chordc1
Cysteine and histidine rich domain containing 1.
   
 0.957
ENSMOCP00000004160
annotation not available
    
 0.957
ENSMOCP00000016906
annotation not available
    
 0.957
Itgb1bp2
Integrin subunit beta 1 binding protein 2.
   
 0.957
Raf1
Raf-1 proto-oncogene, serine/threonine kinase.
    
 0.944
Trap1
TNF receptor associated protein 1.
   
 0.936
ENSMOCP00000000121
annotation not available
    
 0.934
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.